CAD-score

CAD-score: contact area-based comparison of structures and interfaces of proteins, nucleic acids and their complexes

CAD-score web server

Older (original) standalone CAD-score software

Newer CAD-score implementation in the standalone Voronota software

References:

• Description of the method for proteins: 
  Kliment Olechnovič, Eleonora Kulberkytė and Česlovas Venclovas (2013) CAD-score: a new contact area difference-based function for evaluation of protein structural models. Proteins, 81:149–162. [PubMed] [PDF]
• Adaptation for RNA: 
  Kliment Olechnovič and Česlovas Venclovas (2014) The use of interatomic contact areas to quantify discrepancies between RNA 3D models and reference structures. Nucleic Acids Res, 42:5407-5415 [PubMed] [PDF]
• Description of the web server: 
  Kliment Olechnovič and Česlovas Venclovas (2014) The CAD-score web server: contact area-based comparison of structures and interfaces of proteins, nucleic acids and their complexes. Nucleic Acids Res, 42(Web Server issue):W259-W263 [PubMed] [PDF]